Transcript: ENSRNOT00000044866.6 Sf1-202

Description

splicing factor 1 [Source:RGD Symbol;Acc:620645]

Gene Synonyms

Zfp162

Location

Primary_assembly 1: 203,670,032-203,683,300 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 23 domains and features, is associated with 40 variant alleles and maps to 265 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000021085.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028628.8	Sf1-201	3139	649aa	ENSRNOP00000028628.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSC3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000100785.1	Sf1-203	3487	561aa	ENSRNOP00000079109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQ56	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000044866.6	Sf1-202	2647	502aa	ENSRNOP00000041676.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LM37	-
ENSRNOT00000110004.1	Sf1-204	2307	638aa	ENSRNOP00000082510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G7I2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,647 bps, Translation length: 502 residues

Version

ENSRNOT00000044866.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000044866.6 Sf1-202

Summary

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Transcript: ENSRNOT00000044866.6 Sf1-202

Summary

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