Transcript: ENSRNOT00000031005.6 Lrp1-201

Description

LDL receptor related protein 1 [Source:RGD Symbol;Acc:1307535]

Gene Synonyms

LOC299858, LRP-1

Location

About this transcript

This transcript has 89 exons, is annotated with 389 domains and features, is associated with 186 variant alleles and maps to 692 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000108298.1	Lrp1-202	14765	4562aa	ENSRNOP00000085719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0U0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000031005.6	Lrp1-201	14714	4545aa	ENSRNOP00000034210.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V928	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 89, Coding exons: 89, Transcript length: 14,714 bps, Translation length: 4,545 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: G3V928

Version

ENSRNOT00000031005.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.