Transcript: ENSRNOT00000016129.6 Sgtb-201

Description

small glutamine rich tetratricopeptide repeat co-chaperone beta [Source:RGD Symbol;Acc:727976]

Gene Synonyms

Sgt2

Location

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 112 variant alleles and maps to 246 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000016129.6	Sgtb-201	4265	304aa	ENSRNOP00000016129.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q80W98	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000105998.1	Sgtb-202	4253	300aa	ENSRNOP00000083035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GA86	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 4,265 bps, Translation length: 304 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80W98

Version

ENSRNOT00000016129.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.