Transcript: ENSRNOT00000012022.5 Ssrp1-201

Description

structure specific recognition protein 1 [Source:RGD Symbol;Acc:621143]

Gene Synonyms

MGC94298, T160

Location

About this transcript

This transcript has 19 exons, is annotated with 39 domains and features, is associated with 89 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000012022.5	Ssrp1-201	3333	808aa	ENSRNOP00000012022.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q6E8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000091901.2	Ssrp1-202	3324	805aa	ENSRNOP00000073084.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R8I0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 3,333 bps, Translation length: 808 residues

Version

ENSRNOT00000012022.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.