Transcript: ENSRNOT00000006549.6 Prpf40a-201

Description

pre-mRNA processing factor 40 homolog A [Source:RGD Symbol;Acc:1311401]

Gene Synonyms

Fnbp3, LOC295607

Location

About this transcript

This transcript has 23 exons, is annotated with 67 domains and features, is associated with 107 variant alleles and maps to 215 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000104801.1	Prpf40a-203	6474	992aa	ENSRNOP00000083163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVI3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000095713.1	Prpf40a-202	3671	950aa	ENSRNOP00000083490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVY5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000006549.6	Prpf40a-201	3534	929aa	ENSRNOP00000006549.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZJ92	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,534 bps, Translation length: 929 residues

Version

ENSRNOT00000006549.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.