Transcript: ENSRNOT00000092574.2 Upf3b-202

Description

UPF3B, regulator of nonsense mediated mRNA decay [Source:RGD Symbol;Acc:1560264]

Gene Synonyms

LOC313449, RGD1560264

Location

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features, is associated with 36 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000092574.2	Upf3b-202	2389	485aa	ENSRNOP00000075758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RRP3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000032618.6	Upf3b-201	2350	472aa	ENSRNOP00000029696.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZBE8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Protein summary