Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Itch ENSRNOG00000059043

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Description

itchy E3 ubiquitin protein ligase [Source:RGD Symbol;Acc:1359556]

Location

Primary_assembly 3: 143,645,637-143,733,543 forward strand.

mRatBN7.2:CM026976.1

About this gene

This gene has 3 transcripts (splice variants), 280 orthologues, 23 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000105016.1	Itch-202	5148	882aa	ENSRNOP00000083747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZU1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000078235.2	Itch-201	4923	864aa	ENSRNOP00000075116.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K9T1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000106366.1	Itch-203	4754	855aa	ENSRNOP00000092387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AVL7	-

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Summary

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