Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Cldn12 ENSRNOG00000039862

.

Description

claudin 12 [Source:RGD Symbol;Acc:1561053]

Gene Synonyms

LOC500000, RGD1561053

Location

Primary_assembly 4: 28,522,678-28,533,801 forward strand.

mRatBN7.2:CM026977.1

About this gene

This gene has 4 transcripts (splice variants), 187 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000098574.1	Cldn12-203	3919	244aa	ENSRNOP00000084854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A8Y0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000095428.1	Cldn12-202	3844	244aa	ENSRNOP00000096834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A8Y0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000061199.3	Cldn12-201	3642	244aa	ENSRNOP00000057913.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A8Y0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000111546.1	Cldn12-204	3591	244aa	ENSRNOP00000097194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A8Y0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.