Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pcdh9 ENSRNOG00000038068

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Description

protocadherin 9 [Source:RGD Symbol;Acc:1306348]

Gene Synonyms

LOC306091

Location

Primary_assembly 15: 69,340,645-70,237,538 reverse strand.

mRatBN7.2:CM026988.1

About this gene

This gene has 2 transcripts (splice variants), 217 orthologues, 33 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096830.1	Pcdh9-202	5706	1237aa	ENSRNOP00000077280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZK96	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000057924.5	Pcdh9-201	5604	1203aa	ENSRNOP00000054733.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LS01	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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