Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Actb ENSRNOG00000034254

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Description

actin, beta [Source:RGD Symbol;Acc:628837]

Gene Synonyms

Actx

Location

Primary_assembly 12: 11,663,109-11,672,877 forward strand.

mRatBN7.2:CM026985.1

About this gene

This gene has 4 transcripts (splice variants), 128 orthologues, 30 paralogues and is associated with 30 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000080216.2	Actb-202	1933	378aa	ENSRNOP00000072672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K3K2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000105242.1	Actb-203	1907	375aa	ENSRNOP00000088195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P60711	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000042459.5	Actb-201	1719	377aa	ENSRNOP00000044296.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QLX4	-
ENSRNOT00000116486.1	Actb-204	1586	295aa	ENSRNOP00000083381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G8Y4	-

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Summary

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