Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Prdm5 ENSRNOG00000023679

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Description

PR/SET domain 5 [Source:RGD Symbol;Acc:1588700]

Gene Synonyms

LOC689788

Location

Primary_assembly 4: 95,075,768-95,238,301 forward strand.

mRatBN7.2:CM026977.1

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues, 6 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113591.1	Prdm5-204	2153	596aa	ENSRNOP00000080705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQN7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000009569.9	Prdm5-201	1600	501aa	ENSRNOP00000009569.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZRZ9	-
ENSRNOT00000095255.1	Prdm5-202	1567	415aa	ENSRNOP00000095499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMS1	-
ENSRNOT00000102224.1	Prdm5-203	1323	221aa	ENSRNOP00000086425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A661	-

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Summary

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