Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cgn ENSRNOG00000020952

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Description

cingulin [Source:RGD Symbol;Acc:1311992]

Gene Synonyms

LOC310655

Location

Primary_assembly 2: 182,308,714-182,334,645 reverse strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 3 transcripts (splice variants), 88 orthologues, 41 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000116247.1	Cgn-203	4994	1197aa	ENSRNOP00000085785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4L9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000028440.8	Cgn-201	4585	1194aa	ENSRNOP00000028440.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A4X4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000101960.1	Cgn-202	1756	450aa	ENSRNOP00000089863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACK8	-

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Summary

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