Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nisch ENSRNOG00000018823

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Description

nischarin [Source:RGD Symbol;Acc:1306950]

Gene Synonyms

I-1, I1R, IR1

Location

Primary_assembly 16: 6,364,374-6,400,668 reverse strand.

mRatBN7.2:CM026989.1

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues, 1 paralogue and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113930.1	Nisch-203	5572	1646aa	ENSRNOP00000080638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTG9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000106800.1	Nisch-202	5506	1624aa	ENSRNOP00000094287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMT4	-
ENSRNOT00000036910.6	Nisch-201	5106	1495aa	ENSRNOP00000032758.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QGU1	-
ENSRNOT00000115386.1	Nisch-204	2704	516aa	ENSRNOP00000097646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ATD2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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