Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ocln ENSRNOG00000018297

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Description

occludin [Source:RGD Symbol;Acc:620089]

Location

Primary_assembly 2: 31,657,220-31,764,150 reverse strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 5 transcripts (splice variants), 267 orthologues, 5 paralogues and is associated with 22 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000085488.2	Ocln-204	2875	568aa	ENSRNOP00000073691.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K663	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000024674.6	Ocln-201	4150	523aa	ENSRNOP00000024674.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P6T5	-
ENSRNOT00000084667.2	Ocln-203	4038	535aa	ENSRNOP00000068691.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QZI9	-
ENSRNOT00000077537.2	Ocln-202	1924	558aa	ENSRNOP00000070680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JYJ6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000106737.1	Ocln-205	1081	277aa	ENSRNOP00000078336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKQ0	-

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Summary

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