Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: Thtpa ENSRNOG00000018105

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Description

thiamine triphosphatase [Source:RGD Symbol;Acc:727917]

Gene Synonyms

MGC94155

Location

Primary_assembly 15: 28,567,323-28,571,580 forward strand.

mRatBN7.2:CM026988.1

About this gene

This gene has 4 transcripts (splice variants), 173 orthologues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000034073.4	Thtpa-201	2265	242aa	ENSRNOP00000038507.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QJU1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105427.1	Thtpa-203	3059	209aa	ENSRNOP00000096778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AT66	-
ENSRNOT00000114494.1	Thtpa-204	2468	205aa	ENSRNOP00000097892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASR1	-
ENSRNOT00000087430.2	Thtpa-202	888	227aa	ENSRNOP00000068693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTF6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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