Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Snx2 ENSRNOG00000017832

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Description

sorting nexin 2 [Source:RGD Symbol;Acc:1310291]

Gene Synonyms

LOC291464

Location

Primary_assembly 18: 46,602,284-46,643,865 forward strand.

mRatBN7.2:CM026991.1

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues, 16 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000050631.5	Snx2-201	2032	519aa	ENSRNOP00000051352.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2RYP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000096252.1	Snx2-202	1715	484aa	ENSRNOP00000092031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFQ4	-
ENSRNOT00000103655.1	Snx2-203	1615	519aa	ENSRNOP00000086552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A678	-

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Summary

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