Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ston1 ENSRNOG00000016688

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Description

stonin 1 [Source:RGD Symbol;Acc:727878]

Gene Synonyms

Salf, Sblf

Location

Primary_assembly 6: 5,843,185-5,892,449 reverse strand.

mRatBN7.2:CM026979.1

About this gene

This gene has 2 transcripts (splice variants), 195 orthologues, 7 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000022370.7	Ston1-201	5034	713aa	ENSRNOP00000022370.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MAC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000118638.1	Ston1-202	4845	713aa	ENSRNOP00000088331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A974	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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