Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Hmgcs1 ENSRNOG00000016552

.

Description

3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:RGD Symbol;Acc:70970]

Location

Primary_assembly 2: 51,649,497-51,667,100 forward strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 3 transcripts (splice variants), 206 orthologues, 1 paralogue and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000100742.1	Hmgcs1-203	3516	549aa	ENSRNOP00000093563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AX76	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000023554.7	Hmgcs1-201	3307	520aa	ENSRNOP00000023554.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17425	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000095351.1	Hmgcs1-202	3298	517aa	ENSRNOP00000092234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AH54	-

.

Summary

.

.