Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Vtcn1 ENSRNOG00000015279

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Description

V-set domain containing T cell activation inhibitor 1 [Source:RGD Symbol;Acc:1311204]

Gene Synonyms

LOC295322, RGD1311204

Location

Primary_assembly 2: 188,253,594-188,321,658 forward strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 2 transcripts (splice variants), 196 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000020566.7	Vtcn1-201	2619	282aa	ENSRNOP00000020566.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q501W4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000100618.1	Vtcn1-202	2525	282aa	ENSRNOP00000094212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL42	-

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Summary

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