Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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Gene: Slc10a7 ENSRNOG00000011991

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Description

solute carrier family 10, member 7 [Source:RGD Symbol;Acc:1564388]

Gene Synonyms

P7

Location

Primary_assembly 19: 29,183,155-29,407,464 reverse strand.

mRatBN7.2:CM026992.1

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097147.1	Slc10a7-202	3570	340aa	ENSRNOP00000077134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PT50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000015985.8	Slc10a7-201	3615	339aa	ENSRNOP00000015985.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q8N4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000116809.1	Slc10a7-204	3486	312aa	ENSRNOP00000080831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRL6	-
ENSRNOT00000116688.1	Slc10a7-203	3444	298aa	ENSRNOP00000093108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJM8	-

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Summary

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