Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Stx12 ENSRNOG00000011804

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Description

syntaxin 12 [Source:RGD Symbol;Acc:620977]

Gene Synonyms

Syn13

Location

Primary_assembly 5: 145,063,587-145,092,377 reverse strand.

mRatBN7.2:CM026978.1

About this gene

This gene has 5 transcripts (splice variants), 240 orthologues, 12 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000098444.1	Stx12-204	1233	291aa	ENSRNOP00000077790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XWI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000017227.5	Stx12-201	2313	274aa	ENSRNOP00000017227.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V7P1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000100780.1	Stx12-205	1241	289aa	ENSRNOP00000079839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZND6	-
ENSRNOT00000078048.2	Stx12-202	937	287aa	ENSRNOP00000073181.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K4U8	-
ENSRNOT00000085573.2	Stx12-203	886	270aa	ENSRNOP00000069420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVB6	-

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Summary

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