Gene: Pkd1 ENSRNOG00000010771

Description

polycystin 1, transient receptor potential channel interacting [Source:RGD Symbol;Acc:3333]

Location

mRatBN7.2:CM026983.1

About this gene

This gene has 2 transcripts (splice variants), 194 orthologues, 10 paralogues and is associated with 31 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000015092.8	Pkd1-201	14835	4292aa	ENSRNOP00000015092.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MAD3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000116450.1	Pkd1-202	14721	4254aa	ENSRNOP00000089569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AC84	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary