Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Otof ENSRNOG00000009967

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Description

otoferlin [Source:RGD Symbol;Acc:620646]

Location

Primary_assembly 6: 25,928,055-26,024,631 forward strand.

mRatBN7.2:CM026979.1

About this gene

This gene has 3 transcripts (splice variants), 277 orthologues, 4 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000091159.2	Otof-202	7118	1998aa	ENSRNOP00000074490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K867	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000105491.1	Otof-203	6977	1951aa	ENSRNOP00000078196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y9Z3	-
ENSRNOT00000044278.5	Otof-201	6091	1993aa	ENSRNOP00000046997.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9ERC5	-

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Summary

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