Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Plxnc1 ENSRNOG00000007970

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Description

plexin C1 [Source:RGD Symbol;Acc:1307420]

Gene Synonyms

LOC362873

Location

Primary_assembly 7: 29,390,048-29,543,779 reverse strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 3 transcripts (splice variants), 248 orthologues, 8 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000106534.1	Plxnc1-203	7406	1574aa	ENSRNOP00000078419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKT8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000011178.7	Plxnc1-201	7406	1574aa	ENSRNOP00000011178.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A7M0	-
ENSRNOT00000102613.1	Plxnc1-202	7385	1567aa	ENSRNOP00000081399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS48	-

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Summary

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