Summary
- Splice variants
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Comparative Genomics
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Gene: Nup107 ENSRNOG00000006541

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Description

nucleoporin 107 [Source:RGD Symbol;Acc:621160]

Gene Synonyms

p105

Location

Primary_assembly 7: 53,353,743-53,398,370 reverse strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 2 transcripts (splice variants), 203 orthologues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000009203.7	Nup107-201	3040	934aa	ENSRNOP00000009203.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000106167.1	Nup107-202	3191	915aa	ENSRNOP00000096708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQT4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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