Gene: Sde2 ENSRNOG00000003247

Description

SDE2 telomere maintenance homolog [Source:RGD Symbol;Acc:1305572]

Gene Synonyms

LOC289315, MGC109518, RGD1305572

Location

mRatBN7.2:CM026986.1

About this gene

This gene has 2 transcripts (splice variants), 198 orthologues, 1 paralogue and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000078263.2	Sde2-202	3279	493aa	ENSRNOP00000075283.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KA69	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000004350.7	Sde2-201	3177	459aa	ENSRNOP00000004350.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BJN8-1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary