Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pdzk1 ENSRNOG00000000096

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Description

PDZ domain containing 1 [Source:RGD Symbol;Acc:70924]

Gene Synonyms

Clamp

Location

Primary_assembly 2: 184,376,161-184,407,514 forward strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 1 transcript (splice variant), 211 orthologues, 3 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000000107.7	Pdzk1-201	1980	523aa	ENSRNOP00000000107.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JJ40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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