Transcript: ENSPTRT00000087107.1 APH1A-203

Description

aph-1 homolog A, gamma-secretase subunit [Source:VGNC Symbol;Acc:VGNC:91]

Location

Chromosome 1: 128,194,901-128,211,790 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features and maps to 472 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000001250.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000050506.5	APH1A-202	1922	265aa	ENSPTRP00000043775.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WJP4 H2R2D2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000087107.1	APH1A-203	2291	149aa	ENSPTRP00000073216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S8Q5	-
ENSPTRT00000081231.1	APH1A-204	2064	247aa	ENSPTRP00000089295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XEB6 G2HHW2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000088812.1	APH1A-201	1531	195aa	ENSPTRP00000075979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SG11 A0A6D2XK35	-

Summary

Statistics

Exons: 9, Coding exons: 5, Transcript length: 2,291 bps, Translation length: 149 residues

Version

ENSPTRT00000087107.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSPTRT00000087107.1 APH1A-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSPTRT00000087107.1 APH1A-203

Summary

About Us

Get help

Our sister sites

Follow us