Transcript: ENSPTRT00000024248.4 COL6A3-204

Description

collagen type VI alpha 3 chain [Source:VGNC Symbol;Acc:VGNC:10726]

Location

Chromosome 2B: 128,449,658-128,521,692 reverse strand.

About this transcript

This transcript has 43 exons, is annotated with 109 domains and features and maps to 988 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000013074.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000024248.4	COL6A3-204	9534	3177aa	ENSPTRP00000022369.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QJP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000092610.1	COL6A3-205	8916	2971aa	ENSPTRP00000064012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RHA0	-
ENSPTRT00000109786.1	COL6A3-206	7713	2570aa	ENSPTRP00000076299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SHE0	-
ENSPTRT00000093500.1	COL6A3-201	7644	2547aa	ENSPTRP00000089114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TIQ8	-
ENSPTRT00000093410.1	COL6A3-202	7584	2527aa	ENSPTRP00000068881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RVY2	-
ENSPTRT00000104932.1	COL6A3-203	7566	2521aa	ENSPTRP00000075756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SGY5	-
ENSPTRT00000079431.1	COL6A3-207	3629	1036aa	ENSPTRP00000085758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T985 A0A6D2WGI3	-

Summary

Statistics

Exons: 43, Coding exons: 43, Transcript length: 9,534 bps, Translation length: 3,177 residues

Version

ENSPTRT00000024248.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSPTRT00000024248.4 COL6A3-204

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Transcript: ENSPTRT00000024248.4 COL6A3-204

Summary

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