Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [Source:VGNC Symbol;Acc:VGNC:14348]
Chromosome 2B: 94,115,747-94,169,595 reverse strand.
This transcript has 15 exons, is annotated with 21 domains and features and maps to 373 oligo probes.
This transcript is a product of gene ENSPTRG00000012831.7 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000056178.4 | RAPH1-203 | 3911 | 1302aa | ENSPTRP00000048840.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2J8N5K5 A0A6D2VZ03 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000107948.1 | RAPH1-202 | 3753 | 1250aa | ENSPTRP00000092330.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TSX4 A0A6D2WIK9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000087054.1 | RAPH1-204 | 2544 | 644aa | ENSPTRP00000068586.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RVD0 A0A6D2WED4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000093685.1 | RAPH1-206 | 1875 | 624aa | ENSPTRP00000075729.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SFB6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000108411.1 | RAPH1-205 | 1854 | 617aa | ENSPTRP00000089770.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TKI2 A0A6D2XKP3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000077329.1 | RAPH1-201 | 1785 | 594aa | ENSPTRP00000068124.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RTR9 A0A6D2X9U7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |