Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
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ID History
- Gene history

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Gene: SCT ENSPTRG00000028769

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Description

secretin [Source:VGNC Symbol;Acc:VGNC:53165]

Location

Chromosome 11: 550,984-551,907 reverse strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 2 transcripts (splice variants) and 55 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000055767.3	SCT-201	579	125aa	ENSPTRP00000048335.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WYC1 H2R5P1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000092651.1	SCT-202	363	120aa	ENSPTRP00000092158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TSF6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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