Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATRX ENSPTRG00000022047

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Description

ATRX chromatin remodeler [Source:VGNC Symbol;Acc:VGNC:53808]

Location

Chromosome X: 76,990,042-77,290,113 reverse strand.

Pan_tro_3.0:CM000336.3

About this gene

This gene has 5 transcripts (splice variants), 251 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000111037.1	ATRX-203	7479	2492aa	ENSPTRP00000087577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A663D726 K7AL80 Q7YQM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000082274.1	ATRX-201	7461	2486aa	ENSPTRP00000081604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SX79	-
ENSPTRT00000078268.1	ATRX-202	7401	2466aa	ENSPTRP00000066143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RP93	-
ENSPTRT00000062063.3	ATRX-204	7365	2454aa	ENSPTRP00000054614.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WGW4 H2RAW2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000091943.1	ATRX-205	2979	992aa	ENSPTRP00000062389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RDC1	-

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Summary

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