Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTCHD1 ENSPTRG00000021738

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Description

patched domain containing 1 [Source:VGNC Symbol;Acc:VGNC:13539]

Location

Chromosome X: 23,453,015-23,527,245 forward strand.

Pan_tro_3.0:CM000336.3

About this gene

This gene has 3 transcripts (splice variants), 233 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000040338.5	PTCHD1-201	6474	888aa	ENSPTRP00000037271.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WBL4 H2QYE5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000093777.1	PTCHD1-203	597	198aa	ENSPTRP00000090726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TP52	-
ENSPTRT00000106560.1	PTCHD1-202	405	134aa	ENSPTRP00000087853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TF39	-

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Summary

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