Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NCBP1 ENSPTRG00000021167

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Description

nuclear cap binding protein subunit 1 [Source:VGNC Symbol;Acc:VGNC:4797]

Location

Chromosome 9: 75,354,894-75,395,099 forward strand.

Pan_tro_3.0:CM000323.3

About this gene

This gene has 3 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000097997.1	NCBP1-201	4597	790aa	ENSPTRP00000061531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RA69 A0A6D2W455	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000039143.5	NCBP1-203	2370	789aa	ENSPTRP00000036173.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QXJ3	-
ENSPTRT00000105423.1	NCBP1-202	249	82aa	ENSPTRP00000076955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8JWN3 A0A6D2XFM9	-

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Summary

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