Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDH17 ENSPTRG00000020425

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Description

cadherin 17 [Source:VGNC Symbol;Acc:VGNC:6665]

Location

Chromosome 8: 95,776,963-95,892,856 reverse strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 6 transcripts (splice variants), 197 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000079982.1	CDH17-204	3348	867aa	ENSPTRP00000083786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTC9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000037793.4	CDH17-201	3650	832aa	ENSPTRP00000034930.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PLX9 A0A6D2W2K0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000076461.1	CDH17-206	2994	867aa	ENSPTRP00000067884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTC9	-
ENSPTRT00000088762.1	CDH17-205	2784	867aa	ENSPTRP00000090705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTC9	-
ENSPTRT00000093449.1	CDH17-202	2430	809aa	ENSPTRP00000070675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S1F6	-
ENSPTRT00000078011.1	CDH17-203	1743	580aa	ENSPTRP00000081398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWP1 A0A6D2XTJ7	-

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Summary

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