Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHD7 ENSPTRG00000020286

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Description

chromodomain helicase DNA binding protein 7 [Source:VGNC Symbol;Acc:VGNC:913]

Location

Chromosome 8: 61,697,917-61,914,229 forward strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000037572.5	CHD7-201	9661	2997aa	ENSPTRP00000034725.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QW79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000089412.1	CHD7-202	8994	2997aa	ENSPTRP00000083829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3M3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000096004.1	CHD7-203	2847	948aa	ENSPTRP00000074119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SB99	-

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Summary

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