Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCDHB16 ENSPTRG00000017338

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Description

protocadherin beta 16 [Source:NCBI gene (formerly Entrezgene);Acc:462133]

Gene Synonyms

Pcdhb8a

Location

Chromosome 5: 141,213,189-141,226,147 forward strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 2 transcripts (splice variants), 36 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000032078.5	PCDHB16-201	2331	776aa	ENSPTRP00000029637.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QRN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000088934.1	PCDHB16-202	141	46aa	ENSPTRP00000073160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8JIW8 A0A6D2WY24	-

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Summary

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