phosphodiesterase 4D [Source:VGNC Symbol;Acc:VGNC:54161]
Chromosome 5: 54,288,219-55,546,142 forward strand.
Pan_tro_3.0:CM000319.3
This gene has 10 transcripts (splice variants), 244 orthologues and 20 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000101120.1 | PDE4D-202 | 2430 | 809aa | ENSPTRP00000067455.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RRZ5 A0A6D2XWU4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| ENSPTRT00000105973.1 | PDE4D-209 | 4544 | 507aa | ENSPTRP00000061535.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RA89 A0A6D2XFY8 | - |
| ENSPTRT00000090847.1 | PDE4D-210 | 2736 | 518aa | ENSPTRP00000092269.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TSM8 A0A6D2WZH3 | - |
| ENSPTRT00000086514.1 | PDE4D-201 | 2247 | 748aa | ENSPTRP00000068090.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RTQ4 A0A6D2XWP9 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000077717.1 | PDE4D-203 | 2238 | 745aa | ENSPTRP00000065319.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RKV3 A0A6D2W6E7 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSPTRT00000084543.1 | PDE4D-205 | 2100 | 699aa | ENSPTRP00000071610.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3S3N4 A0A6D2W1W2 | - |
| ENSPTRT00000044146.5 | PDE4D-206 | 2064 | 687aa | ENSPTRP00000039216.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6D2XSV2 H2QZM9 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSPTRT00000103380.1 | PDE4D-207 | 2040 | 679aa | ENSPTRP00000090164.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TMN1 A0A6D2WKG5 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSPTRT00000063934.3 | PDE4D-204 | 2022 | 673aa | ENSPTRP00000055480.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6D2WRU2 H2RBC5 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSPTRT00000099609.1 | PDE4D-208 | 1809 | 602aa | ENSPTRP00000065610.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RLN1 | - |
