Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP8A1 ENSPTRG00000016017

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Description

ATPase phospholipid transporting 8A1 [Source:VGNC Symbol;Acc:VGNC:7577]

Location

Chromosome 4: 42,907,520-43,156,505 reverse strand.

Pan_tro_3.0:CM000318.3

About this gene

This gene has 6 transcripts (splice variants), 219 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000029870.4	ATP8A1-202	8255	1164aa	ENSPTRP00000027564.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y8Z9 H2QPE0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000084216.1	ATP8A1-203	8210	1149aa	ENSPTRP00000088822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3THV6 A0A6D2WF77	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000083533.1	ATP8A1-201	7903	1000aa	ENSPTRP00000093744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TWY8	-
ENSPTRT00000107800.1	ATP8A1-204	3471	1156aa	ENSPTRP00000067280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RSJ4	-
ENSPTRT00000087673.1	ATP8A1-205	3468	1155aa	ENSPTRP00000089489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TJS2	-
ENSPTRT00000090686.1	ATP8A1-206	3441	1146aa	ENSPTRP00000089149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TIU8	-

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Summary

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