Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SIDT1 ENSPTRG00000015232

.

Description

SID1 transmembrane family member 1 [Source:VGNC Symbol;Acc:VGNC:7123]

Location

Chromosome 3: 116,650,847-116,750,691 forward strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 2 transcripts (splice variants), 138 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000092491.1	SIDT1-201	5617	832aa	ENSPTRP00000079926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SSD8 A0A6D2WC04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000028470.5	SIDT1-202	5602	827aa	ENSPTRP00000026274.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WVE0 H2QN47	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.