Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPRT ENSPTRG00000013505

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Description

protein tyrosine phosphatase receptor type T [Source:VGNC Symbol;Acc:VGNC:9945]

Location

Chromosome 20: 43,683,696-44,818,488 reverse strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 2 transcripts (splice variants), 202 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000046005.3	PTPRT-202	4356	1451aa	ENSPTRP00000042488.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XF30 H2R1K1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000108851.1	PTPRT-201	3138	1045aa	ENSPTRP00000084887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T6R6	-

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Summary

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