Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ITCH ENSPTRG00000013415

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Description

itchy E3 ubiquitin protein ligase [Source:VGNC Symbol;Acc:VGNC:6170]

Location

Chromosome 20: 35,839,278-35,959,149 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 3 transcripts (splice variants), 280 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000044151.5	ITCH-201	6251	862aa	ENSPTRP00000042219.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VX77 K7BGN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000105451.1	ITCH-202	2577	858aa	ENSPTRP00000086888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TCC2	-
ENSPTRT00000080432.1	ITCH-203	1515	504aa	ENSPTRP00000086599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TBI4	-

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Summary

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