Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZSCAN30 ENSPTRG00000009967

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Description

zinc finger and SCAN domain containing 30 [Source:VGNC Symbol;Acc:VGNC:7824]

Location

Chromosome 18: 32,385,599-32,424,830 reverse strand.

Pan_tro_3.0:CM000332.3

About this gene

This gene has 4 transcripts (splice variants), 90 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000050397.3	ZSCAN30-201	4353	494aa	ENSPTRP00000044543.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WZS8 H2R2W3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000079108.1	ZSCAN30-202	1305	435aa	ENSPTRP00000066293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RPP7 A0A6D2Y019	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000101071.1	ZSCAN30-203	666	221aa	ENSPTRP00000073993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SAX8 A0A6D2W926	-
ENSPTRT00000107022.1	ZSCAN30-204	438	145aa	ENSPTRP00000083008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T2A0 A0A6D2WBW2	-

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Summary

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