Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLTC ENSPTRG00000009472

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Description

clathrin heavy chain [Source:VGNC Symbol;Acc:VGNC:9237]

Location

Chromosome 17: 58,945,279-59,020,614 forward strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 4 transcripts (splice variants), 273 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000086695.1	CLTC-201	6755	1682aa	ENSPTRP00000093953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7CCE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000017365.5	CLTC-202	6730	1675aa	ENSPTRP00000039324.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X581 H2QZP7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000108963.1	CLTC-203	1839	612aa	ENSPTRP00000079572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SRM4 A0A6D2Y8U8	-
ENSPTRT00000098823.1	CLTC-204	885	294aa	ENSPTRP00000071207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2I7	-

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Summary

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