Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: KRT38 ENSPTRG00000009163

.

Description

keratin 38 [Source:VGNC Symbol;Acc:VGNC:9361]

Location

Chromosome 17: 16,183,993-16,190,381 forward strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 3 transcripts (splice variants), 29 orthologues and 80 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000016865.3	KRT38-202	2839	456aa	ENSPTRP00000015609.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WNR8 H2QCY8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000101582.1	KRT38-203	1332	443aa	ENSPTRP00000070504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S0I7	-
ENSPTRT00000084784.1	KRT38-201	1287	428aa	ENSPTRP00000065494.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RLG6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.