Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RPAIN ENSPTRG00000008630

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Description

RPA interacting protein [Source:VGNC Symbol;Acc:VGNC:9571]

Location

Chromosome 17: 5,650,334-5,663,579 forward strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 7 transcripts (splice variants) and 188 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000081509.1	RPAIN-207	696	231aa	ENSPTRP00000088963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TIA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000059907.3	RPAIN-201	1534	219aa	ENSPTRP00000053168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VZG0 H2R9T9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000097284.1	RPAIN-202	1393	172aa	ENSPTRP00000088739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3THN3 A0A6D2XI53	-
ENSPTRT00000095783.1	RPAIN-203	1329	148aa	ENSPTRP00000062301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RCC0 A0A6D2XFW3	-
ENSPTRT00000104763.1	RPAIN-204	1217	106aa	ENSPTRP00000086901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TDF8 A0A6D2YC98	-
ENSPTRT00000077944.1	RPAIN-205	513	170aa	ENSPTRP00000061877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RB51	-
ENSPTRT00000083321.1	RPAIN-206	321	106aa	ENSPTRP00000083739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8KQE5 A0A6D2WZZ0	-

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Summary

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