Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TNFRSF17 ENSPTRG00000007782

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Description

TNF receptor superfamily member 17 [Source:VGNC Symbol;Acc:VGNC:5944]

Location

Chromosome 16: 12,363,124-12,366,360 forward strand.

Pan_tro_3.0:CM000330.3

About this gene

This gene has 2 transcripts (splice variants), 106 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000014324.2	TNFRSF17-201	1281	184aa	ENSPTRP00000013275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XFI5 H2QAL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000077922.1	TNFRSF17-202	408	135aa	ENSPTRP00000087884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TF45 A0A6D2WBI1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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