Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SRSF5 ENSPTRG00000006488

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Description

serine and arginine rich splicing factor 5 [Source:VGNC Symbol;Acc:VGNC:12546]

Location

Chromosome 14: 54,185,271-54,229,971 forward strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000011879.6	SRSF5-201	2817	272aa	ENSPTRP00000010998.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W0V5 H2Q8I9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000083334.1	SRSF5-204	801	266aa	ENSPTRP00000062031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RBK7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000108926.1	SRSF5-203	417	138aa	ENSPTRP00000067698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PJ02 A0A6D2Y0J7	-
ENSPTRT00000095187.1	SRSF5-202	300	99aa	ENSPTRP00000090742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TNC8 A0A6D2WF32	-

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Summary

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