Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCBP2 ENSPTRG00000005018

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Description

poly(rC) binding protein 2 [Source:VGNC Symbol;Acc:VGNC:8490]

Location

Chromosome 12: 36,296,030-36,321,154 reverse strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 4 transcripts (splice variants), 244 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000085023.1	PCBP2-202	1101	366aa	ENSPTRP00000064290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RI11 A0A6D2XU93	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000050462.5	PCBP2-201	1501	331aa	ENSPTRP00000045105.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W9I2 H2R391	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000088609.1	PCBP2-203	936	311aa	ENSPTRP00000089414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TJI5	-
ENSPTRT00000078415.1	PCBP2-204	807	268aa	ENSPTRP00000063902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RGZ8	-

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Summary

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