calcium voltage-gated channel subunit alpha1 C [Source:VGNC Symbol;Acc:VGNC:51248]
Chromosome 12: 2,197,378-2,848,615 forward strand.
Pan_tro_3.0:CM000326.3
This gene has 10 transcripts (splice variants), 211 orthologues and 28 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000008379.5 | CACNA1C-201 | 6561 | 2186aa | ENSPTRP00000007742.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6D2VZV8 H2Q573 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000107840.1 | CACNA1C-206 | 6540 | 2179aa | ENSPTRP00000093594.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TWJ0 A0A6D2Y615 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000077118.1 | CACNA1C-205 | 6522 | 2173aa | ENSPTRP00000088505.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TGV7 A0A6D2XSY4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000079757.1 | CACNA1C-204 | 6522 | 2173aa | ENSPTRP00000081528.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SX18 A0A6D2W157 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000096242.1 | CACNA1C-203 | 6492 | 2163aa | ENSPTRP00000088451.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TGU1 A0A6D2W357 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000082848.1 | CACNA1C-202 | 6468 | 2155aa | ENSPTRP00000081829.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SXU6 A0A6D2W2G9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000093095.1 | CACNA1C-207 | 6351 | 2116aa | ENSPTRP00000074247.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SCM5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000104511.1 | CACNA1C-208 | 6288 | 2095aa | ENSPTRP00000085387.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3T839 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000080839.1 | CACNA1C-209 | 6177 | 2058aa | ENSPTRP00000074019.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SAF6 | - |
| ENSPTRT00000110923.1 | CACNA1C-210 | 2490 | 829aa | ENSPTRP00000079357.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SQQ0 A0A6D2X612 | - |
